CDS
| Accession Number | TCMCG007C29166 |
| gbkey | CDS |
| Protein Id | XP_009142235.1 |
| Location | complement(join(21339496..21339714,21339798..21340026,21340112..21340401,21340524..21340970)) |
| Gene | LOC103866113 |
| GeneID | 103866113 |
| Organism | Brassica rapa |
Protein
| Length | 394aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009143987.3 |
| Definition | polygalacturonase [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Pectate lyase superfamily protein |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R02360 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01184
[VIEW IN KEGG] |
| EC |
3.2.1.15
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005576 [VIEW IN EMBL-EBI] GO:0005618 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0030312 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGATCATACTAATAACAAGCTTGTGGCTGCTTTGCTGATGTTCTTCTCAAGCTTCTTGCTGATGGGTACGTCAATGGCTGCTTCCAACTACAATGTCGTCAACTTCGGTGCTAAACCGGACGGTCGAACCGATTCAACAAAAGCCTTTCTCAGCGCGTGGAAAGCTGCTTGCCGCTCAGCTGCAAGTGTCACAGTAACGGTCCCTAGAGGGAGCTTCTTGTTAAAACCGGTGGAGTTTCGTGGTCCATGTCGCAGTAGAATCACGTTTCTGATCGATGGAACGATTGTAGCTCCTTCAGACTACCGTGGTTTAGGTAATTCCGGTTATTGGATCTTATTCGTTGAAGTTAACCGGATCTCGATCAATGGAGGAACTTTAGATGCTAGAGGTGCATCTTTTTGGGCTTGTCGAAAATCCGGAAAGAGTTGTCCTGGTGGAGCCAGATCGATGACGTTTAACTGGGCAAACGACGTCGTAGTGAGCGGCCTAACGTCAATAAACAGCCAAGTAACACATTTAGTGATAAACAGCTGCAACAATGTAGTTGTCCGGAAAGTGAAGCTAGTGGCTCCAGACCAAAGTCCCAACACAGATGGCCTCCACGTCCAAGCGTCTACTGGTGTGACCGTAACCGATAGCACGTTTCAAACAGGAGATGACTGTATCTCTATCGGTCCGGGAACTCGTAACCTCTACATGTCTAAACTCAACTGCGGTCCAGGCCATGGAATCAGTATTGGGAGTCTAGGGAGAGATGCTAATGAAGCTGGGGTACAGAACATAACGTTGATAAACTCTGTTTTTTCGGGTTCGGATAATGGTGTTCGGATCAAGACATGGGCTAGACAAAGCACAGGTTTTGTGAGAAACATTTTGTTTCAGAATCTGGTCATGAAAAACGTTCAGAATCCAATCATTGTTGATCAGAATTATTGTCCGAATCATCAAGGCTGTCCTAAACAGGGTTCTGGTGTGAAGATTAGTCAGGTCGTGTATAGAAACATTCAAGGGACATCTCGAACACAACAAGCTTTAACGTTTGATTGCAGTCGCAGTAACCCGTGCCAAGCAATTAGATTGCATGACATTAAACTAACGTTCAACGGACGGTCGGCTACTTCGACGTGTAAGAATATTAAAGGAGTCAAGGCTGGTGTGGTAATGCCACAAGGTTGTCTTTGA |
| Protein: MDHTNNKLVAALLMFFSSFLLMGTSMAASNYNVVNFGAKPDGRTDSTKAFLSAWKAACRSAASVTVTVPRGSFLLKPVEFRGPCRSRITFLIDGTIVAPSDYRGLGNSGYWILFVEVNRISINGGTLDARGASFWACRKSGKSCPGGARSMTFNWANDVVVSGLTSINSQVTHLVINSCNNVVVRKVKLVAPDQSPNTDGLHVQASTGVTVTDSTFQTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDANEAGVQNITLINSVFSGSDNGVRIKTWARQSTGFVRNILFQNLVMKNVQNPIIVDQNYCPNHQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNGRSATSTCKNIKGVKAGVVMPQGCL |